| Protein: | srbc-10 |
| Organism: | Caenorhabditis elegans |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srbc-10.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..11] | [292..6] |
|
|
265.0 | [0..12] | [298..4] |
|
Region A: Residues: [1-300] |
1 11 21 31 41 51
| | | | | |
1 MSFTTKSLAI ESGNLMNLSA VVITSIGILS SFFTIFMNIY FIKKITRIRH RMIFFFYRIF 60
61 VDISYGVLAC AYMIFCILYS YFTEELREKQ GFIVYLGFPL QSVAAIRTII AVAISIERVL 120
121 ALCTPVLFHN YRHRFPSIII LILAVCSGIF EDLVLFQSCT LNLSNIPRNC GVLRCAVDKC 180
181 FFDHWADRSI MYALNFLCSG LLSIKLIFFN KSLNGQGEHS KASVNHIALL DAANVFLCDF 240
241 LPNSISNYAA QFEFSSFQNI GPYIYIIKLF GIAIETCFIC WILKLKNTQY QPNTVLPLQK 300
301
|
| Detection Method: |  |
| Confidence: | 5.14 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
