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View Structure Prediction Details

Protein: dhs-22
Organism: Caenorhabditis elegans
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dhs-22.

Description E-value Query
Range
Subject
Range
gi|39589906, gi|... - gi|39589906|emb|CAE60904.1| Hypothetical protein CBG04620 [Caenorhabditis briggsae], gi|187035408|em...
gi|157765146 - gi|157765146|ref|XP_001674916.1| Hypothetical protein CBG04620 [Caenorhabditis briggsae AF16]
267.0 [0..1] [333..1]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGADAEEHG GFLFFVLASS VVFIVLFFTR RYFKGGQFNE RVSAKGLVAV VTGSNCGIGF  60
   61 ETVRELNLRK ADVYMLCRSE EKANEAKRML VRQGCDATRL HFIECDLTDF ESVRRAAKET 120
  121 LESTDTIDIL INNAGIMFQS KHEQTKDGHE KTWQSNHLGP FLLTELFLPA VKKSSYARII 180
  181 NVSSRIHLKS EKINLATVDD KKSFGMMKSY RQSKLANVMH ARALTKELRK DGAEHVTVNS 240
  241 LHPGVVNTEL ARNTILNTPG IKQITAVFRW FLMKTSRDGA QTSIFLALGK KIGGISGKYF 300
  301 ADCKLTQENP LALDDQACQD LYNYSLECTG LAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.154902
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle