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View Structure Prediction Details

Protein: cgef-1
Organism: Caenorhabditis elegans
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cgef-1.

Description E-value Query
Range
Subject
Range
gi|76631945 - gi|76631945|ref|XP_581907.2| PREDICTED: similar to mcf.2 transforming sequence-like [Bos taurus]
273.0 [0..2] [442..792]

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Predicted Domain #1
Region A:
Residues: [1-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTLPRFLS FRRSKRRLIT SVSAPLIVMN YHDGHQYELD SKDVPSCSGE STPAGTLSPR  60
   61 RETREVTNAF DEMIATEISY VADLKDIIIH YLEPFEATEN QNSLPDTLRG KPDCLFGNVR 120
  121 ELYKFHHRTV LEDLVAARST AEMCRVLMQH RNQIYVTYRT YCQIHGSNQK VRDSVKNHPF 180
  181 FKECQRNANH NMDMSSYLLK PIQRIMKYQL LLGNIMDDCP ADVRDEVAMT RDSMVELLNQ 240
  241 IDASMQQLHI SGYNGDLKSL GLLRLQTECD VFTYNRKKKA KLSRAQKRFI FFFDGAVMFC 300
  301 KKRVSNPGTT LNSEPEYFEH KFCIPIISLG YDTSSRTGAS RFEVWDDAKT DAYVIETIDQ 360
  361 TARTKWIQRL GKSETAQDAC LENRQRPKSW ASTVSNESSC SSSTRESDST DSTMDTNGNT 420
  421 QTTQVDVPYS PTLDSSIDLS MDTTTPLRTS EINNEVELVD SC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.522879
Match: 1kz7A
Description: Dbl's big sister, Dbs
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle