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View Structure Prediction Details

Protein: CE08131
Organism: Caenorhabditis elegans
Length: 467 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08131.

Description E-value Query
Range
Subject
Range
gi|67536615, gi|... - gi|67542336|ref|ZP_00420273.1| General substrate transporter:Major facilitator superfamily [Burkhold...
206.0 [0..4] [428..264]

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Predicted Domain #1
Region A:
Residues: [1-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKHSTENEY RVYKERWFIL LATTALICSN IMQWVSFSAQ IDQTNMFFCG PNEYKNCSAA  60
   61 FLSNQIYQIV AVIVSIIGMY FATVFGTLPT LRLSAVFNIV GAAIRLIASL PSLQNFFWRQ 120
  121 FLMIIGTSIA AAAQMYFVVF SKIAESWFYP RHRASANVAC SNSLELGVVL GTVLPSIIVP 180
  181 ASFTKDIVSS WTFFLLNSII AVVCIIPLFL LFVLCRRSVP KTPPSASSQH ESSGPVTSGI 240
  241 FKCLKDRQFL IQIFVYSINF AIANGLIYTS NAINYRGYNL KGYPIAIATM VCMFSAYFVG 300
  301 VIADRTRKFK LIAIINALVV AVCVLVLRLY LIKTYTGWYD SVIVCTLLSI IMSCCAIHTP 360
  361 IGNEMGVETT YPVQESISTG VLNTFGQAWL FCLYFIMYSL QESNWVYKNN RKGGSWELAL 420
  421 DFWAGMSILN FIVAVIFLRP RYNRLQMEEE AQNTREAIRD SVYTICK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.30103
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

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