| Protein: | CE08130 |
| Organism: | Caenorhabditis elegans |
| Length: | 531 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08130.
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..55] | [456..179] |
|
Region A: Residues: [1-531] |
1 11 21 31 41 51
| | | | | |
1 MVRNKVAPVE DGANIQRNFE PPPPYTTPTD SPEDKIRSNS TATTASQPEF QGCWTIVVVA 60
61 ILFIINLLNY MDRYTIAGVL NDVQTYYNIS DAWAGLIQTT FMVFFIIFSP ICGFLGDRYN 120
121 RKWIFVVGIA IWVSAVFAST FIPSNQFWLF LLFRGIVGIG EASYAIISPT VIADMFTGVL 180
181 RSRMLMVFYF AIPFGCGLGF VVGSAVASWT GHWQWGVRVT GVLGIVCLLL IIVFVREPER 240
241 GKAEREKGEI AASTEATSYL DDMKDLLSNA TYVTSSLGYT ATVFMVGTLA WWAPITIQYA 300
301 DSARRNGTIT EDQKANINLV FGALTCVGGV LGVAIGTLVS NMWSRGVGPF KHIQTVRADA 360
361 LVCAIGAAIC IPTLILAIQN IESNMNFAWG MLFICIVASS FNWATNVDLL LSVVVPQRRS 420
421 SASSWQILIS HMFGDASGPY ILGLISDAIR GNEDTAQAHY KSLVTSFWLC VGTLVLSVIL 480
481 FGISAITVVK DKARFNEIML AQANKDNTSS GTLPIEDRNT EDETGSEVQH M
|
| Detection Method: |  |
| Confidence: | 34.30103 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 1.05701989682533 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
