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View Structure Prediction Details

Protein: CE08073
Organism: Caenorhabditis elegans
Length: 208 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08073.

Description E-value Query
Range
Subject
Range
gi|39593025, gi|... - gi|39593025|emb|CAE62639.1| Hypothetical protein CBG06772 [Caenorhabditis briggsae], gi|187034299|em...
142.0 [0..7] [184..8]
CE22273 - trypsin inhibitor status:Partially_confirmed UniProt:Q9UAZ2 protein_id:AAD14760.1
139.0 [0..9] [184..11]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPHIYHLL PGFLIHGALS PRCSKSIFDS NLTAKCEKSS TIKFHFDQST GLCMNFRWDG  60
   61 CKDQENKFDS LQECASTCLK SNYKGCPFHR NPAIPQQCAS HKDCNWKTSK INSHYCTRKG 120
  121 ICCQSKDLEE LRSEFNVTCP DGRRKVEYTY KSTTRLLIGK TCSSNICPLN AMCHQKKYFS 180
  181 FCCKKKYNLL IKDILYYEYQ KILSLGEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.09691
Match: 1bikA
Description: X-RAY STRUCTURE OF BIKUNIN FROM THE HUMAN INTER-ALPHA-INHIBITOR COMPLEX
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle