| Protein: | str-225 |
| Organism: | Caenorhabditis elegans |
| Length: | 347 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for str-225.
| Description | E-value | Query Range |
Subject Range |
|
|
168.0 | [0..1] | [346..1] |
|
Region A: Residues: [1-347] |
1 11 21 31 41 51
| | | | | |
1 MLGKEWSALL QLVQHSTAVF SIIINTFLIY LILTKSPKQL GAYKWLMVYI SVFEIFYSIL 60
61 DVVLVPQHYS HGSTFLVIVG IKEKILGPGG LLILNACYWG CYGASMAVFS LHFIYRWLVV 120
121 TENPLLETFN GWKIILWFSI PLWYALVWIS TGYILSAPNE STSRYIKDSV KEIFGLEFDE 180
181 YVYLGPYLYE KAVNGNIHVA IKALLSLGII SVTIVSSLII VLAFGILCYQ KINQLVATTA 240
241 ASVKLIKLQR QLFYALVVQT IVPFVLMHIP GAIMIAFVFL DIDLGVYSAV LSMTIAIYPA 300
301 VDPIPTLIIV ENYRKTILEF CGCVKKSRIS VTSTVERPKS VMISSNI
|
| Detection Method: |  |
| Confidence: | 38.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
