YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: stdh-1
Organism: Caenorhabditis elegans
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stdh-1.

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
277.0 [0..44] [299..2]

Back

Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIEWFATGV GAVVVLYILY HFIRITLNIL GPYVFCQPID LKKKAGASWA VVTGATDGIG  60
   61 KSYSFELAKR GFNVYIVSRT QSKLEHTKKE ILEVHPDIEV RFATFDFTNP SVSDYEKLLS 120
  121 KLNEVSIGIL INNVGMFFDY PEMLHKINGG IDSIANVTII NTLPATLLSA GILPQMVPRK 180
  181 AGIIVNIGSV AGLATMAEWS VYSATKKYVE WITGCLQKEY GHQGIIFQAI TPAMVATKMA 240
  241 GNPNTSFFTP DSDTFAKSAL NTIGHASQTT GYITHQIECE MLKLLPDFVI DRSIKQTSAQ 300
  301 LREALAKNEN KPLM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.0
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle