| Protein: | snx-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 472 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snx-1.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..4] | [471..49] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MLSEEDVHTN SYAGRTVAVM EQPDLFSDDC DEINLGNEDT PPSKLRLHTT EEPKESSSPA 60
61 VINSIEDHDQ YVGNDNHYAQ ISPEP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [86-224] |
1 11 21 31 41 51
| | | | | |
1 ALSNFKVTMR EFEKRGDGMN AYIVYKLETE VSGVVGYTKQ HYETWRRFSD FLGLHGKIVE 60
61 KYLAKGIVIP QPPEKSISAL TKTKTNSDPA MSREVGIQRA RQLERYICRL IQHPRMRNDC 120
121 DVRDFLTIES DLPKAVQTA
|
| Detection Method: | |
| Confidence: | 28.045757 |
| Match: | 2i4kA |
| Description: | No description for 2i4kA was found. |
|
Region A: Residues: [225-472] |
1 11 21 31 41 51
| | | | | |
1 ALSSFGVKKI FKNFQVVFSK MAFHMEEGDR WFEQVQSQVD ELDEALRKLY TVTETLVASR 60
61 RDMATSGEQL GKALSMLAAC EESTSLSRAL SSLTDVTENV SAVYGKQAEV DNSKFSESIY 120
121 EYIMLISALK DVFGERVRAW QQWQDAQQTL ARKRDQKTKI DLSAGGRNER SDQLKGEIED 180
181 TVQKMDQLEQ HFIELSKAIR EEVARFDADR KQDMKKMLVE YMESMIHTHT ELLHLWEKFE 240
241 PEANNIRV
|
| Detection Method: | |
| Confidence: | 18.221849 |
| Match: | 2ficA |
| Description: | No description for 2ficA was found. |
