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View Structure Prediction Details

Protein: tag-293
Organism: Caenorhabditis elegans
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-293.

Description E-value Query
Range
Subject
Range
CE06071 - WBGene00010519 status:Partially_confirmed TR:Q27502 protein_id:CAB00865.1
220.0 [0..132] [385..725]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYESAVSSKT QRVIVTLIIF AISLTGLVAN LLVLMFAKTL KIFQNSFGRL SASQSFAEAV  60
   61 LCAVFLCFYC PMVLLFASNI YEKFIFLRGN ARFTPETCKR FVLLYRKILK THFFNDKFIY 120
  121 TVIIFTQSSS LRLSDMFGLL VSCILAFTVP ESAFADISGD LNCTQYNGTF FVWTPAAVAC 180
  181 SNAVSDASCT ALYPTEDEQG YPAAGNNAGR PLACFTTAAE TPAPVDGDMK KAALTNCAKT 240
  241 CGFCCNTDDY SCPNAQFPRL NCDTITNNQC KDPNWRTIIA TDCPSAC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 2j4yA
Description: No description for 2j4yA was found.

Predicted Domain #2
Region A:
Residues: [288-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFCNQGGCVD AVVDCANDRS ICQSVGMQEF VNQNCQRTCG RCGSSTGNPS VPGGGSCTNY  60
   61 QADSSTACAA WAGNGFCTNT FYTEAQRKAS CATTCRLC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle