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View Structure Prediction Details

Protein: CE07857
Organism: Caenorhabditis elegans
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07857.

Description E-value Query
Range
Subject
Range
gi|220953220 - gi|220953220|gb|ACL89153.1| CG9520-PA [synthetic construct]
C1GalTA-PB, C1Ga... - The gene Core 1 Galactosyltransferase A is referred to in FlyBase by the symbol Dmel\C1GalTA (CG9520...
237.0 [0..13] [322..23]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYSMRKIES DQMDRIALYT LLLTFSLSLI VFPLYRNFLI PADLYTHFPA IIHPYREYYS  60
   61 LTRNVNKLTQ GIEDSEATY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLPTSGQLFC FVETSKKYFN DRVPSMASTW LPRCDNGRFF LKTPLVDEKI PFSTVYRNLE  60
   61 DSYYDLFRKT LLSFYYSYTY ISKDFDWYLK ADDDNYFMID HLKEYLDTLD ASKPLFLGYR 120
  121 MKPFLEGGYN SGGAGYLLSN AAVRIFVEHL YHDEKRCPYD WAEDRGIARC LASMGILPSD 180
  181 TRDNDGSCRF LPFRPSEMPG IPEAYHYYPL KNGSFVSEKF ISLHRISPRK MIFLDSILYP 240
  241 SSERRLFTPE FFDIF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.045757
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
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