| Protein: | cln-3.2 |
| Organism: | Caenorhabditis elegans |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cln-3.2.
| Description | E-value | Query Range |
Subject Range |
|
|
314.0 | [0..1] | [430..256] |
|
Region A: Residues: [1-435] |
1 11 21 31 41 51
| | | | | |
1 MDVASGGGRR PPRNSVAFWL LGLCNNFAYV VMLSAAKDIL EKDAKHIEKP CREHVTTREC 60
61 QMMSTGSVLL ADIIPALLIK ITAPMFIHRV PFGIRHSIVV LLQASSFLIV GISDSTALAL 120
121 FGVVLASFGS GLGEISYLAL SSNYPSTVVA SWSSGTGGAG LIGASAYALL TDSKLLAISP 180
181 KHTMFIMLTL PALFSVSYWS ILKIPHSVQR AHFLQPSTWL VTGDFIPADD MRREEVEEEE 240
241 GLLGIREDRE NSVDVTSRRR QTSTTLERVL PLLKFMIPLI SVYLAEYYIN QGLLELLEFD 300
301 CSHGFSMSSE SQYRWFQVTY QLGVFISRSS SNYVTIPTQY LKSLAVLQIF NAGFFTITAI 360
361 YSFLPHILIA FLVILFEGLL GGASYVNTFR AVHKEIPADS REFSMGVVSI SDTIGIVFAG 420
421 FLAMPVHNRI CSMPM
|
| Detection Method: |  |
| Confidence: | 6.30103 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| binding | 1.89539096965643 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 0.901989724654833 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 0.901989724654833 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
