| Protein: | clec-117 |
| Organism: | Caenorhabditis elegans |
| Length: | 185 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-117.
| Description | E-value | Query Range |
Subject Range |
|
|
129.0 | [0..16] | [182..450] |
|
|
125.0 | [0..4] | [181..1035] |
|
|
122.0 | [0..18] | [181..2154] |
|
|
121.0 | [0..18] | [181..2122] |
|
|
120.0 | [0..9] | [184..598] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MLKALLPLLL WISTGSTAPA GVATYLRSNG IVAFHKLYHL KMNFPRAKKH CEQNGAHLAG 60
61 ITSREEAQKL IDLANEAGES NEQYWLGGQR KGECYGMRNY DKDHGLNATC SLSNVVQWLD 120
121 NVAETIDPDW WKIPGPSHIP FNMPQQCLSF VHGDRDWTTP NDPGFLDDIG CDVPRKFFCT 180
181 ELHEW
|
| Detection Method: |  |
| Confidence: | 19.30103 |
| Match: | 1sl6A |
| Description: | Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13629480035749 | bayes_pls_golite062009 |
| carbohydrate binding | 0.44675717945952 | bayes_pls_golite062009 |
| protein binding | 0.059857076934361 | bayes_pls_golite062009 |
