| Protein: | glh-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 720 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glh-3.
| Description | E-value | Query Range |
Subject Range |
|
|
480.0 | [0..14] | [705..1] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MDKSPTKTSI RTKFARHQPI SDVDTTEQSS SCIKKDDRGL SSFGVQSSVF SRRSCRMSEL 60
61 EAKPTIISED QRIAVRSEIG GSFSGFDDKV DNVFHSNN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [99-194] |
1 11 21 31 41 51
| | | | | |
1 NLHGSPSTTE LECPGIMNPR FLVGRSLNSR SRAVTRGSKR TSNVKENEGS IHRSDDQVST 60
61 ENCSAKDEER DRDSGGVSSY GNKRSDEFCG TSPILE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [195-282] |
1 11 21 31 41 51
| | | | | |
1 AKGFGISNTC FNCKKYGHRA TECSAPQREC ANCGDPNHRA NECASWSKNG VQEPTKVTYV 60
61 PVVDKMEEVF SMLKINAGDF FDKFFDAS
|
| Detection Method: | |
| Confidence: | 2.28 |
| Match: | 2cqfA |
| Description: | Solution Structure of the Zinc-finger domain in LIN-28 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [283-720] |
1 11 21 31 41 51
| | | | | |
1 VQLVSRGQPV TIQPCKSFSD SDIPQSMRRN VERAGYTRTT PIQQYTLPLV ADGKDILACA 60
61 QTGSGKTAAF LLPIMSRLIL EKDLNYGAEG GCYPRCIILT PTRELADQIY NEGRKFSYQS 120
121 VMEIKPVYGG INVGYNKSQI MKGCTIIVGT IGRVKHFCED GAIKLDKCRY LVLDEADRMI 180
181 DSMGFGPEIE QIINYKNMPK NDKRQTMMFS ATFPSSVQEA ARKLLREDYT MITIDKIGAA 240
241 NKCVIQEFEL CDRTSKVDKL LKLLGIDIDT YTTEKNSDVF VKKTIVFVAQ QKMADTLASI 300
301 MSAAQVPAIT IHGAREQKER SAALKLFRSG AKPVLIATAV VERGLDIKGV DHVINYDMPN 360
361 NIDDYIHRIG RTGRVGNSGR ATSFISLADD VQILPQLVRT LADAEQVVPS WMKEAAGGTS 420
421 NPNKFEKSID TEEPEEAW
|
| Detection Method: | |
| Confidence: | 104.0 |
| Match: | 2i4iA |
| Description: | No description for 2i4iA was found. |
