YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE07660
Organism: Caenorhabditis elegans
Length: 91 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07660.

Description E-value Query
Range
Subject
Range
par-1 - status:Partially_confirmed UniProt:Q17368 protein_id:CAB54262.2
77.0 [0..1] [88..1]
gi|66734180 - gi|66734180|gb|AAY53487.1| serine/threonine protein kinase par-1 [Caenorhabditis remanei]
48.0 [0..23] [90..5]

Back

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVSGYFMG ISKKNGQKKH PARPSTESST SSSHHRRPAQ EMNGTSTATA TGGGGTSGAT  60
   61 TTASSGAPAA SSGGSSARYS SSGRSHPTSG R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.359 a.8.8 Description not found.
View Download 0.315 a.4.5 "Winged helix" DNA-binding domain
View Download 0.295 d.354.1 Description not found.
View Download 0.286 a.28.1 ACP-like
View Download 0.285 d.4.1 His-Me finger endonucleases


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle