| Protein: | CE07550 |
| Organism: | Caenorhabditis elegans |
| Length: | 574 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07550.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..10] | [264..21] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MTDIISQNEN KDDFEDGELP EDGEICDDED ESVKAVPSKS SESAPGAHIA PAHPEKTSGR 60
61 DSRERVRRFE GNSPPRERDP DPFGSHNDAP DGNDYFGGDK DYRSGAAASS EEEPFSDTDY 120
121 RVNRRRRLSP SHDDGDFDPR SKRPYYGG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [149-280] |
1 11 21 31 41 51
| | | | | |
1 RGGFRGGFRN GAKPRFQTEH QICKFFREGY CRDGDNCLYS HQAEDSLRRP VLCNFYANSF 60
61 CKKGLQCLML HGEFPCKSFH KGQCNHDPCR FSHVPLTDYT RPIIEKILAD EEARQAHQAQ 120
121 QAQTYRQNPV AN
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 2cqeA |
| Description: | Solution Structure of the Zinc-finger domain in KIAA1064 protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [281-396] |
1 11 21 31 41 51
| | | | | |
1 AAAAAAAAQV MPRRRVLLPG GPNMNGSSPP HATPVIHAPI PQASHPSQLP PPAVVVPTIQ 60
61 RNPGPGIPIH QQYPVAPAAG GYFNQGPRPE QVQGLPPPRT IEPPRLSTQT PPIMHQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [397-574] |
1 11 21 31 41 51
| | | | | |
1 QQPQLMRPMH PVPIQHPHLQ QPGLVQPPQI VSQERHTASP QGFNLEAMLN KMANGEKLIS 60
61 SPRNNVVDDS PASPPPSNYS SMFGSSNRVA VIPQTVQVTW GLVRVQRRLP YSNVENPDRI 120
121 AANDPRRAKA IAKQFDAFSS LLGAGGNAVS DPRLRAQKEK NDRQQNTMPF SSWMPQIS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
