| Protein: | lgc-32 |
| Organism: | Caenorhabditis elegans |
| Length: | 497 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-32.
| Description | E-value | Query Range |
Subject Range |
|
|
314.0 | [0..172] | [487..93] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MNHFFLFVHF FKFSIFDAKF KLPMYQLFTV LRKIHWHRAD FFKQNILSHY FIPENNLIYP 60
61 NFLDLILKMK YRIWILLIFI PIVVLCDDCT SDEDVIADLL GRNSHSSGEI VIKSNYKIAK 120
121 WLYNSVAHEL ST
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [133-497] |
1 11 21 31 41 51
| | | | | |
1 EGFFEMSWTH LYSYFQKIFQ YRKFDNSKSS CQKKLLKNWK IFLKIRKMLS LSRNVYIIAT 60
61 IYVKIYKNLH YKMCKLLFVL VRKICKFIKN RQLDRIMAGT NTTLDFTNLN ACHKTVRIKS 120
121 LLHIFWLPHV YFPFSYNLEE SRNLYNIEIH ESGNITLSKR LKQSIPCKEQ SDSHPFSNNT 180
181 CTLSWKYTNL DNYQKIVIEP SNLMDSVERE HSRQFILKDV TFESSGDDEQ RLHYTITQTP 240
241 QYLLLHFFFP ALLFLIPPWL SLLLGPMAIT RCIILMTSLI LLSNHYDRNV TVFPIDASLN 300
301 AISIWQLFTY IYVIGIVIEL IIITLFASMG RSKTCCFAKR RSAKYEMEPL YEEMNDLRQR 360
361 KTRLS
|
| Detection Method: | |
| Confidence: | 63.30103 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
