YRC Public Data Repository - Protein Structure Prediction

Protein:	CE07286
Organism:	Caenorhabditis elegans
Length:	299 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07286.

Description	E-value	Query Range	Subject Range
gi\|28204459, gi\|... - gi\|28212016\|ref\|NP_782960.1\| pyrroline-5-carboxylate reductase [Clostridium tetani E88], gi\|28204459...	203.0	[0..15]	[296..3]
gi\|89159827, gi\|... - gi\|89210565\|ref\|ZP_01188953.1\| Delta 1-pyrroline-5-carboxylate reductase [Halothermothrix orenii H 1...	198.0	[0..15]	[296..1]
gi\|71488115, gi\|... - gi\|71546052\|ref\|ZP_00666917.1\| Delta 1-pyrroline-5-carboxylate reductase [Syntrophobacter fumaroxida...	197.0	[0..11]	[295..1]
gi\|20807808 - gi\|20807808\|ref\|NP_622979.1\| Pyrroline-5-carboxylate reductase [Thermoanaerobacter tengcongensis MB4... gi\|20807808, gi\|... - gi\|20807808\|ref\|NP_622979.1\| pyrroline-5-carboxylate reductase [Thermoanaerobacter tengcongensis MB4...	197.0	[0..15]	[293..1]
gi\|67849921, gi\|... - gi\|67916119\|ref\|ZP_00509840.1\| Delta 1-pyrroline-5-carboxylate reductase [Clostridium thermocellum A... gi\|196251994, gi... - gi\|196251994\|ref\|ZP_03150658.1\| pyrroline-5-carboxylate reductase [Clostridium thermocellum DSM 4150...	196.0	[0..16]	[295..4]
gi\|218541204, gi... - gi\|218898056\|ref\|YP_002446467.1\| pyrroline-5-carboxylate reductase [Bacillus cereus G9842], gi\|21854... gi\|228858122, gi... - gi\|228901519\|ref\|ZP_04065702.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 4222],... gi\|228908746, gi... - gi\|228908746\|ref\|ZP_04072580.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 200], ... gi\|75764862, gi\|... - gi\|75764862\|ref\|ZP_00744228.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar isr...	193.0	[0..14]	[299..2]
gi\|22830927, gi\|... - gi\|50904457\|ref\|XP_463717.1\| putative pyrroline-5-carboxylate reductas [Oryza sativa (japonica culti...	193.0	[0..16]	[296..20]
P5CR_SOYBN - Pyrroline-5-carboxylate reductase OS=Glycine max PE=2 SV=1	192.0	[0..9]	[294..5]
gi\|110683434, gi... - gi\|110802933\|ref\|YP_699882.1\| pyrroline-5-carboxylate reductase [Clostridium perfringens SM101], gi\|...	192.0	[0..14]	[283..2]
gi\|70802403, gi\|... - gi\|70802403\|gb\|AAZ12308.1\| pyrroline-5-carboxylate reductase, putative [Trypanosoma brucei], gi\|6217... gi\|71749908, gi\|... - gi\|72391146\|ref\|XP_845867.1\| pyrroline-5-carboxylate reductase [Trypanosoma brucei TREU927], gi\|7174...	192.0	[0..13]	[295..173]

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Predicted Domain #1

Region A:
Residues: [1-299]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIDTELTNG SSESVPFVFI GGGNMAAAII KGCQNKGFTP KSNIVIGVQT EKSAEKWRQL  60
   61 GYKNVFTNTL EMLERYSTAI YVICVKPQVF EEVVSSWPVN SRPEFIISVM AGVPLKVLNA 120
  121 KLPFVSGNTT IVRLMPNVAS SIGAGASTMC YEKNEKIMNQ DSHIELAREF AECVGTVELI 180
  181 PERCFNPAMA IGGSSPAWTF MYIESLADGA VAQGLGRAEA KRLAAQAVLG AAQMVLNSNS 240
  241 GFDIETQHFG SLKDMVCSPG GTTIEGVRAL EKNGFRYAVM EAVVAASTKA DEMAKSLAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.39794
Match:	2izzA
Description:	No description for 2izzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits