| Protein: | taf-11.1 |
| Organism: | Caenorhabditis elegans |
| Length: | 345 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf-11.1.
| Description | E-value | Query Range |
Subject Range |
|
|
160.0 | [0..186] | [341..18] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MNANDLFGGL SESSGSSDED DDTVMPQPTG AHNVLADLEL SDDDGDEDFS RDGMRSDENQ 60
61 ISPGQESVPT PITPRAPVVF SLSDGEDSMD MPDIDQMMMK RNAAAAAAAA AEEQAAREAE 120
121 ADRVAEANRA AETAKTAEKR KIDKISKSEP PRKQPRHDDN SEAGPSGQIS GDDDLLDTNI 180
181 SLES
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [185-345] |
1 11 21 31 41 51
| | | | | |
1 FDLSKVNDAR YQALIQQHQP EEEAPGPSRP APARPARKLD DEEENELSRL KTQVLLSNFS 60
61 QEQLERYESY RRSSFQKSTI RRLISQYTGG VNVGQSVVIA IAGLAKVFVG EVVEEALDIR 120
121 DINEEEASNP LQPHHIRQAF LRLGEQGKLF PPIGPKQSHL E
|
| Detection Method: | |
| Confidence: | 32.30103 |
| Match: | 1bh8B |
| Description: | TAF(II)28 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.581886805340955 | bayes_pls_golite062009 |
