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View Structure Prediction Details

Protein: CE07168
Organism: Caenorhabditis elegans
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07168.

Description E-value Query
Range
Subject
Range
gi|10434352, gi|... - sp|Q9H9J4|UB42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 (Ubiquitin thiolesterase 42) (Ubiquiti...
212.0 [0..13] [319..90]

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Predicted Domain #1
Region A:
Residues: [1-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYVISVNKG RFEDIFNNPK VIALFENKPI LKPAPIYNSC LECFAISVCQ ALLACPPFVR  60
   61 YVKEKIAETK LDMHMKSLVA QFAAHSIPAA GSGDWPRVSI SKLLNSIPGG FNGKCREDAE 120
  121 DWYRQLSKEF YDETFGQVSA YYKTVCHECG KCREINDKSP RVQLRCPDLE ITAANIESML 180
  181 AVTGNEIVTW EHDGCENTTC RETTRYEFPD VILVSVDTFQ DGNRHIGKEL EFFPTEDFSP 240
  241 ISVNNDEPDI FHLGGVIYFR TFNCFRDESS GHYMARVYHH GNVFLADDNR IYEQNINRPT 300
  301 EPANSVPYFA FYYRQRRAGR F

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Detection Method: PSI-BLAST
Confidence: 40.0
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle