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View Structure Prediction Details

Protein: CE07136
Organism: Caenorhabditis elegans
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07136.

Description E-value Query
Range
Subject
Range
gi|39579516, gi|... - gi|39579516|emb|CAE56341.1| Hypothetical protein CBG24013 [Caenorhabditis briggsae], gi|187040564|em...
287.0 [0..18] [337..14]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQPDEPSN STVGELPSQY KRMSAAREPS NSQSSKIVYF IVPIIVASCL LWMAHVQWKS  60
   61 SSKVEQFHKN VEEIENQEKI RIEGVHDLKE TLQPFADGYR TDNFIPKHNL AICEIKGNFP 120
  121 ELNAAICCYL HNPSLFTAAN KTISQDLVEN GLCSKEDSFR MTTWDKWTKY VTDKVCHVAI 180
  181 IQHPLERFSR SFVEICIKQK ACYNCQDNVD CFMKKLLREH SPLAEGLEGN YRTYVTHHFS 240
  241 PQTWNCHFNR DLNKIQFLKF GGSKEDLAKF LTDLDKILGE QGVEADVRSV ITNEINKIPL 300
  301 ELTPEEQVVK DNIRNNEDLF RLFRNLYEHD YILFGYSL

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Detection Method: FFAS03
Confidence: 1.41
Match: 1q44A
Description: Crystal Structure of an Arabidopsis Thaliana Putative Steroid Sulphotransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.805174200700339 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle