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View Structure Prediction Details

Protein: CE07085
Organism: Caenorhabditis elegans
Length: 668 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07085.

Description E-value Query
Range
Subject
Range
CE12032 - status:Predicted UniProt:O16731 protein_id:AAB66195.1
485.0 [0..1] [444..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRMDPKSH DVIVDELDFS TMPGTQSGVL NSRWTPIGLK NNFQAAGPYE FILTNNSRSY  60
   61 LNLKRTYLIF TFKITNSDGN IVKMETDEAK NTQVYAPINN IAHSIVKNFT LHINSQLAFH 120
  121 NSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYAYKSYFEH VLMYGKEIQN STLTAAGFYH DPVIGDHRSP GFQQRCASIY NQGEIQVAAN  60
   61 ISIDLMNQPR VLLNGCNVKL TVYPNDSKFL IEAYNRDNNT EFQFKITDVY ALVNEFDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADGLSNALES SIIEHKIIQY PLISSQVRSF YIESGRLDAP ANTLFTSKMP RRIFIGLVDS  60
   61 DAYNGSYDKS PFNFKPHGIS DIHVDYCGMT LP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [334-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRPFALDFDR NKFMEAYIQL QETLGHSRSN STCNSISTQM FKEGGYTIFG FELSPVAQDT  60
   61 SLFELVRQTN VSIRLNFREK VPVGGLYCIV YAEFDQIFSL DFMRNPIVDT IIAVENIHSE 120
  121 MYAKLLEAYI RDDAERNILF NAITTFKFIK AKADWCLRWI SDHNAPFSER LAAFAAVEGI 180
  181 FFSSSFAAIF WLKKRGLLPG LTHSNELISM FLLHPNCFFS TFNLQRRRKP AESRITEIIN 240
  241 ESVLVEQDFV RESLPTNLIG MNQHMMCKYV EFVADLLLEE LGYSKRYNTK NPFDFMENIS 300
  301 IEGKTNFFEK RVSEYQRPEM MVDESEKVFD LSALF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 1h0nA
Description: Ribonucleotide reductase R2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle