| Protein: | CE07004 |
| Organism: | Caenorhabditis elegans |
| Length: | 425 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07004.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..52] | [420..96] |
|
Region A: Residues: [1-425] |
1 11 21 31 41 51
| | | | | |
1 MATLEKKHSF FLLDPFFLLK SPTERARFQF LSLLLFPDFL IKIRLLFQMN ASTNATTTFV 60
61 PWDHKTLQIV MFLNSKVLIL QIIFGCGGNI LNLMVLLSRA MRSRTNLIFA AMAFADLFFL 120
121 ILHIPSVLFF IGTIRDAPWY RNGFSQVIAG MLNWSSAVSI WFMMYATIER VQVFRSPFRT 180
181 SKRSASTRFF ITLFSIAFFC LLLTIVHFIH PKTRAANKYA RYVVYIHMIF VVIIPMFLST 240
241 SLNILLVCAL RKNSMPLRML NDSHVHQSLI VQRTRTERKV TAMVTVILSS FIACNVPGSI 300
301 VFVMKESDDT FDDSRRHILM QAVCNSLAVT GKVLNFLLFC LSSEHFRALL KKRDPQAVEM 360
361 EEMRIVEIET ADRKIKRNWS YVKKNELKFE SAEKAKPSPV VCIKGNDESE INLLEKKTSS 420
421 ISKYS
|
| Detection Method: |  |
| Confidence: | 41.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
