| Protein: | npr-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for npr-1.
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..1] | [285..1] |
|
Region A: Residues: [1-457] |
1 11 21 31 41 51
| | | | | |
1 MEVENFTDCQ VYWKVYPDPS QSIYAIVPFL TVYLFLFFLG LFGNVTLIYV TCSHKALLSV 60
61 QNIFILNLAA SDCMMCILSL PITPITNVYK NWYFGNLLCH LIPCIQGISI FVCTFSLGAI 120
121 ALDRYILVVR PHSTPLSQRG AFLTTVLLWI LSFVVTLPYA FNMQMIEYTE ERICGYFCTE 180
181 KWESAKSRRA YTMIVMLAQF VVPFAVMAFC YANIVSVLSK RAQTKIRKMV ERTSALESSC 240
241 AFPSHGLEQY ENELNEFLDK QEKEKQRVVL QNRRTTSILV TMVVWFGITW LPHNVISLII 300
301 EYDDTQSFFR LYGRDDYDIS YLLNLFTHSI AMSNNVLNPV LYAWLNPSFR QLVIKTYFGD 360
361 RRKSDRIINQ TSVYKTKIVH DTKHLNGRAK IGGGGSHEAL KERELNSCSE NLSYHVNGHT 420
421 RTPTPEVQLN EVSSPEISKL VAEPEELIEF SVNDTLV
|
| Detection Method: |  |
| Confidence: | 46.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
