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View Structure Prediction Details

Protein: CE06891
Organism: Caenorhabditis elegans
Length: 481 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06891.

Description E-value Query
Range
Subject
Range
gi|157752408 - gi|157752408|ref|XP_001679916.1| Hypothetical protein CBG20621 [Caenorhabditis briggsae AF16]
gi|187022920, gi... - gi|39591162|emb|CAE73215.1| Hypothetical protein CBG20621 [Caenorhabditis briggsae], gi|187022920|em...
610.0 [0..1] [478..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLRKKLHEA IVDGEEDDCP KRKIKKLDIQ VDAATKVFSN QHILHDIIEY TVDGDKSILD  60
   61 NLRLRLVSRS FNNVVLSKVR AEFKMVQVCP YQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPEGADEKEE PEYDESNDIE DRSFMINDRR TWFSQVPRFF EFLNSVARIR VRDLLFSGFT  60
   61 SPDQRIHECI LYSLLDGNWY SLNSYKGADE LCNGCAVCSG NCFPLLAEIA LHCVTMVGSR 120
  121 EEAFSRLTKM ITQDVNCDQL DLVFSDRCMW SKGT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [247-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAHPREVIDR IVKAWRVKSI NIRFMTEYSS IDHEMWSNKR IFTEMRFDEM FVTDHNIIRP  60
   61 RHERD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [312-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HFERVEVDMQ AGDEIATCFA ESMGMFEQSG MSATAFQNVC ANVKRIFPTQ DMYLILPTEL  60
   61 AHVASVEFDG FCKALLEFAW KDERTARHSR LFFRLYTFGI TEEQVLRQTE NQFKINCRPV 120
  121 AAMLSDSSVR RSFLQWLPGS TSTFDRSLLS FTDVWNNCVL HLEVCIEADC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle