| Protein: | CE06880 |
| Organism: | Caenorhabditis elegans |
| Length: | 360 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06880.
| Description | E-value | Query Range |
Subject Range |
|
|
259.0 | [0..3] | [323..112] |
|
Region A: Residues: [1-360] |
1 11 21 31 41 51
| | | | | |
1 MLLLLSRVLV NVMVLMCFGG ILTNFISFYI YTRKTFRKKS INVLLAALSM SDLCVCVLAI 60
61 PVFASTQLQQ VIPPTITAMI MVYLYPVTIM FQSVSVWLLV SITIDRYLAV CHPFMVNTYC 120
121 TRNRALITVG VVVIFSVAYN LIRIWEYTIN FDVAPENRTI EDLVVPKLRA NPHFLLWYQN 180
181 VATLVSQFAF PLTVLCVLNI QVARTIIEAS EQRRELVASV KREHSTAKMM IMVVLVFLVC 240
241 YIFSFILNIW EILDKETFGG DIGWFMNDIN NVLIVVNSTS AIVFYYKYST RFRNQARTLP 300
301 GIRWYASMSK FNVYDTEATS NRTMVTRYKE SMISIRGTST RLSSSHNLLY KPSYSKPCDI 360
361
|
| Detection Method: |  |
| Confidence: | 41.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
