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View Structure Prediction Details

Protein: prx-3
Organism: Caenorhabditis elegans
Length: 205 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prx-3.

Description E-value Query
Range
Subject
Range
gi|157770057 - gi|157770057|ref|XP_001676849.1| Hypothetical protein CBG14834 [Caenorhabditis briggsae AF16]
gi|187028184, gi... - gi|39598179|emb|CAE68871.1| Hypothetical protein CBG14834 [Caenorhabditis briggsae], gi|187028184|em...
328.0 [0..10] [205..158]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILTLEAFRQ NYIPESMNSM WNSRTGSNGL SPTDNPMDVG NRRIFLQCVQ YFTLRGIPEL  60
   61 MEYVAEAIPN ELQNWKLTDI KSKTEMRDFF DRVSYRISFN GLLTKLVAPL DGDGQDNSSS 120
  121 VMKLLQKLTT NLESSKSIHV LNSLLDFYFS AALKMVENDE QPLVKYVPAF SNSFPILTST 180
  181 AFDSPLFNSL YSSDIHQFAV YVFNS

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle