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View Structure Prediction Details

Protein: CE06711
Organism: Caenorhabditis elegans
Length: 151 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06711.

Description E-value Query
Range
Subject
Range
gi|39587201, gi|... - gi|39587201|emb|CAE57669.1| Hypothetical protein CBG00662 [Caenorhabditis briggsae], gi|187038890|em...
gi|157749829 - gi|157749829|ref|XP_001678628.1| Hypothetical protein CBG00662 [Caenorhabditis briggsae AF16]
157.0 [0..35] [151..30]
CE03285 - phospholipase A2 status:Partially_confirmed UniProt:Q20022 protein_id:CAA90245.1
154.0 [0..35] [151..172]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAKFQGSSN FLIYILVTSL IAFKICVFCQ QTISIGDTGV TLATMNNTIP ASNFSCGANR  60
   61 FTEFIPQLFN STECKNLRDP MNVCCETHDN CYNTQIGKDF CDNEFCLCLS TATEKNLCAV 120
  121 DAAGFCAAVR LFGETAYNTL GGLEPVSPTI N

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.977
Match: 1gp7A
Description: Snake phospholipase A2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.389307920841874 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle