| Protein: | col-145 |
| Organism: | Caenorhabditis elegans |
| Length: | 294 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for col-145.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..37] | [293..1389] |
|
|
185.0 | [0..39] | [293..314] |
|
|
182.0 | [0..31] | [294..1879] |
|
|
163.0 | [0..36] | [294..268] |
|
|
160.0 | [0..1] | [286..769] |
|
|
160.0 | [0..29] | [293..229] |
|
|
158.0 | [0..29] | [293..244] |
|
|
144.0 | [0..3] | [294..5] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MEKILVTFST GAASIAVLAV LFTVPSLYNT INEVHDQVLD GVSVFRVETD SAWTEMMDIQ 60
61 I
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.404 | N/A | N/A | d.68.5 | C-terminal domain of ProRS |
| View | Download | 0.335 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.306 | N/A | N/A | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.305 | N/A | N/A | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.269 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
|
Region A: Residues: [62-294] |
1 11 21 31 41 51
| | | | | |
1 TVTPPTKPRV NPFNSVFRQK RQTFSGLPAW CQCEPTKPTC PPGPPGPPGQ PGAPGTPGAP 60
61 GPKGDDNTAT FAPLTCAQVS QDCVKCPQGP AGPAGPSGPA GPAGPDGQPG FPGQRGNDGF 120
121 PGAPGAPGDN GQPGTPGQDG FPGQPGADGQ RGSGAPGAPG APGNAGPAGP AGQDGFPGQD 180
181 GAPGPAGPAG QDGFPGNAGS DGQPGAPGGP GLPGNDAAYC ACPPRSAVFL SRH
|
| Detection Method: | |
| Confidence: | 24.30103 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
