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View Structure Prediction Details

Protein: CE06568
Organism: Caenorhabditis elegans
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06568.

Description E-value Query
Range
Subject
Range
gi|187025633, gi... - gi|39594989|emb|CAE70857.1| Hypothetical protein CBG17645 [Caenorhabditis briggsae], gi|187025633|em...
gi|157758203 - gi|157758203|ref|XP_001671445.1| Hypothetical protein CBG17645 [Caenorhabditis briggsae AF16]
162.0 [0..9] [108..1]
CE35383 - status:Partially_confirmed UniProt:Q17662 protein_id:AAA96189.2
113.0 [0..35] [96..55]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVGPHRCFL ISLIVYTLTV TTSSARLILE DTTVRSEEDS GPSCPVLADE PVGEVMERIC  60
   61 DMCHELSSHS RPNMRVECRA DCFTTDAFRE CLKLFTPRRH TRHLRQKY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.71
Match: 1j0tA
Description: Mlt-inhibiting hormone (MIH)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle