YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: cyc-2.2
Organism: Caenorhabditis elegans
Length: 123 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cyc-2.2.

Description E-value Query
Range
Subject
Range
CYC_CYPCA - (P00026) Cytochrome c iso-1/iso-2
146.0 [0..17] [118..1]
CYC_SCHGR - (P00040) Cytochrome c
145.0 [0..15] [117..3]
CYC_DANRE - Cytochrome c OS=Danio rerio GN=cyc PE=3 SV=3
145.0 [0..17] [118..2]
gi|89272026 - gi|89272026|emb|CAJ83237.1| cytochrome c, somatic [Xenopus tropicalis]
144.0 [0..17] [119..9]
CYC2_XENLA - Cytochrome c, testis-specific OS=Xenopus laevis GN=cyct PE=3 SV=3
143.0 [0..17] [118..2]
gi|108879930, gi... - gi|94468578|gb|ABF18138.1| mitochondrial cytochrome c [Aedes aegypti], gi|157106248|ref|XP_001649238...
143.0 [0..15] [118..4]
CYC_HIPAM - (P00007) Cytochrome c
142.0 [0..17] [117..1]

Back

Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKKSDTAS GGAIPEGDNE KGKKIFKQRC EQCHVVNSLQ TKTGPTLNGV IGRQSGQVAG  60
   61 FDYSAANKNK GVVWDRQTLF DYLADPKKYI PGTKMVFAGL KKADERADLI KFIEVEAAKK 120
  121 PSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.154902
Match: 2b4zA
Description: Crystal structure of cytochrome C from bovine heart at 1.5 A resolution.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle