| Protein: | CE06514 |
| Organism: | Caenorhabditis elegans |
| Length: | 632 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06514.
| Description | E-value | Query Range |
Subject Range |
|
|
261.0 | [0..25] | [630..1] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MHNCIDAGKT RGRGKEMEKE EKEASMSFTY IDIDSEVEST AMSERVRARH KKRVPHTSED 60
61 VMAFEPDVDF STAGGHFPRV YLPPEHERKY SDDEDDGEYN DEDFAH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [107-632] |
1 11 21 31 41 51
| | | | | |
1 LIPDPNVDPN ANWFKRTHDT LKGDISSILL LLFLYLLQGV PLGLIGAIPL LLSGKHVSYG 60
61 SQAIFSFAYW PFSLKLLWAP IVDSVFSKRL GRRKSWMVPC QYLIGAFMLY LSYKVNDIMG 120
121 DNGGSPNVVF LMLIFLPLNF LAATQDIAVD GWALTMLSRK NVGYASTCNA VGQTAGYFLG 180
181 NIVFLALESP TFCNDFLRSK ENYKDTGIID LAGYVFFWGW VFIVTTTLVL VLKREVDKSV 240
241 PSNQNNGEVV PAGEEDEELE LGVAESYAVL YKILKLKSIH YMVAILLTGK LAFAASDGMT 300
301 SLKLIEMGIP KDRLAGIGVF LTPMQIMLPW MIGKWTAGPR PLNVFLLAFP YRIFIGGVFA 360
361 ALVWWTPHFS LPDGKFEYSV YIVWITGYIF HQLATYSMFV SMMAFIAQIS DPRIGGTYMT 420
421 MLNTLNNLGG NWPVTVVLAV TDWFTYKDCV VKGTKEILYA CNTKVLADQC SSGGDVCEVA 480
481 VDGYFISVAI CSVIGVIWYK VFYNKIKYLQ KIPRSQWRVF PSRSAE
|
| Detection Method: | |
| Confidence: | 40.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
| binding | 1.3181781780038 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
