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View Structure Prediction Details

Protein: glb-26
Organism: Caenorhabditis elegans
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-26.

Description E-value Query
Range		 Subject
Range
HBB_ANAPP - Hemoglobin subunit beta OS=Anas platyrhynchos platyrhynchos GN=HBB PE=1 SV=1
 163.0 [0..28] [166..4]
HBB_TURME - Hemoglobin subunit beta OS=Turdus merula GN=HBB PE=1 SV=1
 163.0 [0..28] [166..4]
HBB_RHEAM - Hemoglobin subunit beta OS=Rhea americana GN=HBB PE=1 SV=1
 162.0 [0..28] [166..4]
HBB_STROE - Hemoglobin subunit beta OS=Streptopelia orientalis GN=HBB PE=1 SV=1
 162.0 [0..28] [166..4]
HBB_PASMO - Hemoglobin subunit beta OS=Passer montanus GN=HBB PE=1 SV=1
 162.0 [0..28] [166..4]
HBB_COLLI - Hemoglobin subunit beta OS=Columba livia GN=HBB PE=1 SV=1
 162.0 [0..28] [166..4]
gi|73988393 - gi|73988393|ref|XP_542374.2| PREDICTED: similar to Hemoglobin epsilon chain [Canis familiaris]
 161.0 [0..19] [166..39]
HBB_AYTFU - Hemoglobin subunit beta OS=Aythya fuligula PE=1 SV=2
 161.0 [0..28] [166..5]
HBB_STUVU - Hemoglobin subunit beta OS=Sturnus vulgaris GN=HBB PE=1 SV=1
 161.0 [0..28] [166..4]
HBB_BRACA - Hemoglobin subunit beta OS=Branta canadensis GN=HBB PE=1 SV=1
HBB_CYGOL - Hemoglobin subunit beta OS=Cygnus olor GN=HBB PE=1 SV=1
 161.0 [0..28] [166..4]

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Predicted Domain #1
Region A:
Residues: [1-183] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSTSTPAP PPKKNKPEGR KADNQILNSY QKSIVRNAWR HMSQKGPSNC GSTITRRMMA  60
   61 RKSTIGDILD RSTLDYHNLQ IVEFLQKVMQ SLDEPDKISK LCQEIGQKHA KYRRSKGMKI 120
  121 DYWDKLGEAI TETIREYQGW KIHRESLRAA TVLVSYVVDQ LRFGYSRGLH VQGSRETKED 180
  181 DEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.045757
Match: 1c7dA
Description: Hemoglobin, alpha-chain
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle