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View Structure Prediction Details

Protein: CE06440
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06440.

Description E-value Query
Range
Subject
Range
APMAP_MOUSE - Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1
255.0 [0..1] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSDGSVRR RRGEDDDGGR VVPLPEKKHK KVPKSQKPGL ILRILGSTPV KIVLGLLGSL  60
   61 IIAGLLTNRI INAPIKAVEF DLGDKIPLEG VLAVNKRLTD AELLLVDQVY GPESLVLDEK 120
  121 NSKLYAGFKT GIIAEIDMKE GREKIVHAVQ LAQGNHDCDG SYKKMNLCGR PLGLRLSDVG 180
  181 ELVIADAYLG LFAINWQEEK VVKILGAGEL PANNENAAPI KYLNDLDILP DGRVIFTESS 240
  241 TKFDDRDFIL DLFEHRPNGR LLIYDPRKKD LRVLKDGLYF PNGVQLSIEK GMGKNAPWRV 300
  301 LYSEMGLARV MQIWVPRDHY STAPVKTSPL IENLPGYPDN IRLTKSGHLL IPIASHRSEE 360
  361 DRFLEQNPSV REFITKILSP QALGYVANYV ADVEGLVIKV NTETGQIIES YHDQTGRVEA 420
  421 VSIAIDDGKG RMLLGSDVNY YIARAKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 1v04A
Description: serum paraoxonase by directed evolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.466814313865256 bayes_pls_golite062009
catalytic activity 0.231415846654952 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle