| Protein: | CE06428 |
| Organism: | Caenorhabditis elegans |
| Length: | 495 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06428.
| Description | E-value | Query Range |
Subject Range |
|
|
259.0 | [0..26] | [480..577] |
|
Region A: Residues: [1-495] |
1 11 21 31 41 51
| | | | | |
1 MPRIRLRNDV SSSSFWTRIT GQKWSKHHVF IFVHTFMSYA MLHATRKTLS TVKPSLIHTW 60
61 ISNTSTPDGP VFPSQQAAAE FLGVLDTGFL VAYAIGLYIC GILGDNYNPR RLLTAGMMLS 120
121 SIIVFCFGYL TETFHFYSPM VYSFLWILNG FIQSVGWPVE VSIMGNWFGH NARGAVMGAW 180
181 SSCASVGNII GTLIASYTLF LGYQYSFLIA CSLLFIYSFL VFFQLPSAPW EVSSDILPEQ 240
241 MEEEETDDEP TERPPPIGFL KAWLLPGVIA YSLAYACLKL VNYGFFFWLP YYLHAGLHWP 300
301 ESYADSLSTW YDVGGIVAAV LAGAFSDHMR SRTPVVFIML LMATVSLYIY AHSPESYNWN 360
361 AFLLLVAGFF IGGPANMISS SITADLGKCD QLRGNAEALS TVTGIIDGTG SIGAAIGQWF 420
421 IPSVQHWFGW DAVFYGFIVM ILCTALCLVP VLWKEHKERR IHRSEEVDSL LQSDSDENLA 480
481 DDIQEIRRRP TNAIV
|
| Detection Method: |  |
| Confidence: | 43.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glycerol transmembrane transporter activity | 7.11654923455995 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 6.7545566917184 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 6.7545566917184 | bayes_pls_golite062009 |
| glycerol-3-phosphate transmembrane transporter activity | 6.56587510931539 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 0.805286077372817 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
