YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: acl-2
Organism: Caenorhabditis elegans
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acl-2.

Description E-value Query
Range
Subject
Range
gi|157765502 - gi|157765502|ref|XP_001675094.1| Hypothetical protein CBG04832 [Caenorhabditis briggsae AF16]
gi|39590084, gi|... - gi|39590084|emb|CAE61082.1| Hypothetical protein CBG04832 [Caenorhabditis briggsae], gi|187035586|em...
214.0 [0..1] [280..1]
gi|27362190, gi|... - gi|27365990|ref|NP_761518.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio vulnificus CMCP6...
195.0 [0..27] [272..2]
gi|2564952, gi|2... - gi|2564952|gb|AAB82009.1| lysophatidic acid acyl transferase-alpha [Mus musculus], gi|254281343|ref|...
192.0 [0..4] [263..7]
gi|52424565, gi|... - gi|52424565|ref|YP_087702.1| PlsC protein [Mannheimia succiniciproducens MBEL55E], gi|52306617|gb|AA...
191.0 [0..29] [268..4]
gi|50758008 - gi|50758008|ref|XP_415716.1| PREDICTED: similar to Myeloperoxidase precursor (MPO) [Gallus gallus]
189.0 [0..15] [261..869]
gi|55249755, gi|... - gi|55249755|gb|AAH85852.1| 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acy...
189.0 [0..4] [263..7]
gi|12720314, gi|... - gi|15601968|ref|NP_245040.1| hypothetical protein PM0103 [Pasteurella multocida subsp. multocida str...
188.0 [0..29] [268..4]
gi|1841552 - gi|1841552|gb|AAB47493.1| LPAAT [Homo sapiens]
188.0 [0..17] [263..15]

Back

Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFWSIVVF FLLSILFILY NISTVCHYYM RISFYYFTIL LHGMEVCVTM IPSWLNGKGA  60
   61 DYVFHSFF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [69-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YWCKWTGVHT TVYGYEKTQV EGPAVVICNH QSSLDILSMA SIWPKNCVVM MKRILAYVPF  60
   61 FNLGAYFSNT IFIDRYNRER AMASVDYCAS EMKNRNLKLW VFPEGTRNRE GGFIPFKKGA 120
  121 FNIAVRAQIP IIPVVFSDYR DFYSKPGRYF KNDGEVVIRV LDAIPTKGLT LDDVSELSDM 180
  181 CRDVMLAAYK EVTLEAQQRN ATRRGETKDG KKSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 1iuqA
Description: The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle