| Protein: | CE06239 |
| Organism: | Caenorhabditis elegans |
| Length: | 581 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06239.
| Description | E-value | Query Range |
Subject Range |
|
|
361.0 | [0..39] | [563..77] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MSLAFRTLSF GIKRSQPKKK DADDLNKKKE LSTITEESLR RYDELREKMI GKVESKIEKK 60
61 VKKNKKKASI EILASRKRVH DSDGDSENEV EETVGDVEKR MQKLLDDIRR TNRIFTWGDH 120
121 LPNII
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [126-521] |
1 11 21 31 41 51
| | | | | |
1 LRFSDSSMSP SLLNRLSENS IRQPSPIQMQ SIPFMTERRN VLASAPTGSG KTLAFALPVI 60
61 DEILELKQRA DYSSSNSSKL LAVVLEPTRE LAAQTYTEFL KYCANTSISA ANFSGEETDI 120
121 QHADILVSTP NRIVFHLDKI DTSSLRWLVV DESDRLFEVV EGQDKCFRNQ LAAIYKACDA 180
181 KCTRVAFFSA TFSHEVEKWC KENIDEIGMV CVGERNSSNT SVKQKLTYCG TEDGKKIAIR 240
241 NLLRTSFKPP ALVFVQSKDR AVQLVKLLSA IDSNLKVDSI NSGKSDKERD ETMERFRRGE 300
301 IWVLVCTELL GRGLDLSDVG LVINYDLPTS IVSYIHRVGR TGRAGKSGHA VTYFTDADMK 360
361 YIKSIATVIR QSGFDVPEYL MEMKKVSRDR KKDMLK
|
| Detection Method: | |
| Confidence: | 85.30103 |
| Match: | 2i4iA |
| Description: | No description for 2i4iA was found. |
|
Region A: Residues: [522-581] |
1 11 21 31 41 51
| | | | | |
1 HAPKRHKIAI VKEQVIKKKK MLAKAAAEEK AKNKTETQTA EKPEKKIKKK KLIKKNNKNI 60
61
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 1d9xA |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
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