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View Structure Prediction Details

Protein: unc-119
Organism: Caenorhabditis elegans
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-119.

Description E-value Query
Range
Subject
Range
gi|157775645 - gi|157775645|ref|XP_001665888.1| hypothetical protein CBG18291 [Caenorhabditis briggsae AF16]
UN119_CAEBR - Protein unc-119 OS=Caenorhabditis briggsae GN=unc-119 PE=3 SV=2
356.0 [0..1] [219..1]
U119B_MOUSE - Protein unc-119 homolog B OS=Mus musculus GN=Unc119b PE=1 SV=1
341.0 [0..22] [218..46]
gi|109496020 - gi|109496020|ref|XP_222229.2| PREDICTED: similar to Unc119c [Rattus norvegicus]
337.0 [0..22] [218..46]
UNC119 - unc-119 homolog (C. elegans)
335.0 [0..10] [218..16]
gi|182891388, gi... - gi|94536711|ref|NP_001035484.1| unc-119 homolog 2 isoform 1 [Danio rerio], gi|92097691|gb|AAI15148.1...
334.0 [0..32] [218..74]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAEQQQQSI APGSATFPSQ MPRPPPVTEQ AITTEAELLA KNQITPNDVL ALPGITQGFL  60
   61 CSPSANVYNI EFTKFQIRDL DTEHVLFEIA KPENETEENL QAQAESARYV RYRFAPNFLK 120
  121 LKTVGATVEF KVGDVPITHF RMIERHFFKD RLLKCFDFEF GFCMPNSRNN CEHIYEFPQL 180
  181 SQQLMDDMIN NPNETRSDSF YFVENKLVMH NKADYSYDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1ksgB
Description: GMP-PDE delta
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.7540809354913 bayes_pls_golite062009
protein binding 1.24728746254811 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle