YRC Public Data Repository - Protein Structure Prediction

Protein:	CE06201
Organism:	Caenorhabditis elegans
Length:	125 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06201.

Description	E-value	Query Range	Subject Range
gi\|68436321 - gi\|68436321\|ref\|XP_699659.1\| PREDICTED: similar to tyrosine 3-monooxygenase/tryptophan 5-monooxygena...	221.0	[0..1]	[125..1652]
gi\|109087133 - gi\|109087133\|ref\|XP_001098275.1\| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase activa...	221.0	[0..1]	[125..454]
gi\|47211584 - gi\|47211584\|emb\|CAF91856.1\| unnamed protein product [Tetraodon nigroviridis]	217.0	[0..1]	[125..181]
gi\|114576225 - gi\|114576225\|ref\|XP_525684.2\| PREDICTED: similar to 14.3.3 protein [Pan troglodytes]	215.0	[0..1]	[123..292]
gi\|30354619 - gi\|30354619\|gb\|AAH51814.1\| YWHAZ protein [Homo sapiens]	210.0	[0..1]	[123..196]
gi\|73957780 - gi\|73957780\|ref\|XP_546936.2\| PREDICTED: similar to 14-3-3 protein gamma [Canis familiaris]	208.0	[0..1]	[125..222]
gi\|17017334 - gi\|17017334\|gb\|AAL33624.1\|AF440230_1 protein kinase A activity reporter 1 fusion protein [synthetic ...	203.0	[0..1]	[115..352]
gi\|530049 - gi\|530049\|gb\|AAC37321.1\| 14-3-3 protein	203.0	[0..1]	[123..105]

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Predicted Domain #1

Region A:
Residues: [1-125]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADHFRYLV QYDDINREEH AHKSRIAYQE ALGIAKDKMQ PTHPIRLGLA LNASALNFDV  60
   61 LNLPKEANEI AQSALDSAHR ELEKMKSSLD SYDISNLKRA RTLYDLLKST HEQRVDGKEG 120
  121 EEADN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.522879
Match:	2c1jA
Description:	Molecular basis for the recognition of phosphorylated and phosphoacetylated histone H3 by 14-3-3
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits