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View Structure Prediction Details

Protein: CE06195
Organism: Caenorhabditis elegans
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06195.

Description E-value Query
Range
Subject
Range
gi|3859534, gi|2... - gi|3859534|gb|AAC72836.1| asparagine synthetase [Arabidopsis thaliana], pir||T51888 asparagine synth...
327.0 [0..1] [464..63]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIDYNRWWH LKDETLGEEL KGYIKMIEED YLVYSGTTSQ LHVSKLSNGS VNSIVNEILE  60
   61 QQGSWSIIYY NQKLKKLFIG RDVFGRQSLV FNFESMIFGC RTKPETSGKW IEIPFGQVTV 120
  121 FSLDSTDPVI YSYLDEYPEN VLDGYFSGSD ISRIVVNKKH GLLNVSRSTG GEIDSFNTKD 180
  181 LFQKVIDATK ILLKNYHESH VAVCLSGGVD STFVAHVVHS SVPENMQIDL INVAFGNSEK 240
  241 ECEQAPDRKR ARKALESFRT AYPTRQFRLI LVNVDSQTLE VNRKESISDA AQPASSVLDD 300
  301 SLSCVLWFAV RAEGVDSENQ QSVRSPATTC LLGSGADELL AGYARHRTRF EKEQIPENVA 360
  361 EECENELRRL GSRNGGRDAR VAAQLGKTIL SPLLEDTVVT WLNALPVDSK WDLSLPRGVG 420
  421 EKQLLRETVK MLGSPYDAPK QAMQFGSRMA KMSNAGDNSI KGSDKSPHLL KTDVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.221849
Match: 1ct9A
Description: Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.6665721924779 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle