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View Structure Prediction Details

Protein: CE06187
Organism: Caenorhabditis elegans
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06187.

Description E-value Query
Range
Subject
Range
gi|9507011, gi|2... - gi|9507011|ref|NP_062013.1| protein tyrosine phosphatase, receptor type, S [Rattus norvegicus], gi|2...
355.0 [0..23] [439..1242]

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Predicted Domain #1
Region A:
Residues: [1-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSKQNVTR RKKKRQDDTI AEDEQEPTQQ PTSKEMSKEA MKKGKSKEKE RASKDKMSAS  60
   61 GEKAEKEKDL KFVAATKGLC KYILDMKEAS LNTYFDANLA NYSPSKCTFN EWEKNVNKNR 120
  121 TKDVKLIDAT RVVLTNPEKS KMGPADDVEG YINASHIRFD NASTDYILTQ YPLPSTIRDF 180
  181 WKMVYVTKVT QVITIFEPIK DEAIEEFANF PAPASPVPPP PTASSKDIGS SPDQQPRERE 240
  241 QIEIKSIRCD NHLHQSFFPL STDHYLNLEG WLINTRAVEV DQRCKNWMNK YTVEVVADGC 300
  301 SEATFAKVYN CTTWPWKSYP DDVKKVLALV RAPVKESSPT VGKQPPVIVM CDLGLDRSAT 360
  361 VVLTSIIIEQ VLDGKTPDCD DLFRKMRDQR AGVFTMSIFF TYAIRAALFY LKLKLQCLNE 420
  421 NGNEDVKTMI TEALAKVPFL TKKAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.69897
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

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