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View Structure Prediction Details

Protein: fmo-2
Organism: Caenorhabditis elegans
Length: 529 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fmo-2.

Description E-value Query
Range
Subject
Range
gi|148707245, gi... - gi|148707245|gb|EDL39192.1| RIKEN cDNA 4831428F09 [Mus musculus], gi|109730629|gb|AAI12406.1| Flavin...
380.0 [0..1] [529..1]

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Predicted Domain #1
Region A:
Residues: [1-529]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNKRVAVIG AGASGLPSIR HGLLYGFDVT CFEASDDIGG LWRYKSHETN ESSVMKTTVI  60
   61 NTSKEMTAYS DFTPQENLAN FMHNNEMLNY FKSYAEHHGL MKHIKLRHRV LNIERSKNYD 120
  121 NDGTWKVIYQ TPEEKTLEEI FDGVLVCSGH HAIPHWPKPF PGQNEFKGRI VHSHDYKDHK 180
  181 GYEDKVVVVV GIGNSGIDVA VEQSRIAKQV YLVTRRGTWL IPKLETRGLP FDIIMNTRFF 240
  241 SLYKLFPQAM LNSLVEYRIN QRIDHDLYGL KPAHRVFSAH PSLNDELPNR IANGTVRIKP 300
  301 NIKKFDGYAI HFEDGTIVPH VDEVVMSTGF SFEFNLIEHG KLVPVSENEV DLFKYMFPVA 360
  361 TSDHNSLCII GLIQPFGSIM PVSEQQARVF FANMVSGNNL IPKKSQMSED VLNKKEAMAQ 420
  421 QFVKSRRHTI QVDYIPYMDE LAELIGCQVP LLRTLFTDPV LGLRLFFGPN AGYCYRLAGP 480
  481 HTWNGARNAI LTIDQRVRMA TTTKPEPTNY TVPLVISSII LLLVIYFVM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 2a8xA
Description: Crystal Structure of Lipoamide Dehydrogenase from Mycobacterium tuberculosis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle