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View Structure Prediction Details

Protein: CE06133
Organism: Caenorhabditis elegans
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06133.

Description E-value Query
Range
Subject
Range
gi|28628306 - gi|28628306|gb|AAO38709.1| cation diffusion facilitator 10 [Stylosanthes hamata]
240.0 [0..15] [347..65]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTRKRKEN GIEKKKEVVK SNVSPEAQKK VDEFYNNQKE LLQKFDEDQK TIGKPLQKTA  60
   61 EEDERYEDRV LAQATFALNI GSLIGNLAAS IISGSLSIMS TFVDSSMDIA CSFVMNICLS 120
  121 EINKTDAQKY PRGRDRLELI GVILCSVIMA FANVSMIMQS INSIVNDTVD PKMTNSTIAI 180
  181 IVIQTVLKGI IMWFCYKRGS TSSLVIAMDL RNDLMTRSLA LVCGYLGDYV WKFADPIGAI 240
  241 CVCTWIAYSW CRHAIDNIPQ LVGITAERDQ LARILNITLK HDKRIKYIDH SMIYYTGLNA 300
  301 QVELHIVLDE KLPLRITHDI SHDLEKNIQK LDFVERCFVH VDYNCDGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.221849
Match: 2qfiA
Description: No description for 2qfiA was found.

Predicted functions:

Term Confidence Notes
transporter activity 0.0225298510244101 bayes_pls_golite062009
transmembrane transporter activity 0.00888573638791978 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle