| Protein: | CE06113 |
| Organism: | Caenorhabditis elegans |
| Length: | 493 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06113.
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..3] | [486..88] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MASSAPPRFC TDYAKRVAKC QKCKMQLEKG VLRMGKIMPN FFVAAKDPSK PPPDMKQYFH 60
61 TNCLFEMLFK ARPTTKVIDE TDEIEGFEDL NAEDQDEIKK LVDELAEKRS KDGPAEPKK
|
| Detection Method: |  |
| Confidence: | 30.0 |
| Match: | 1uw0A |
| Description: | Solution structure of the zinc-finger domain from DNA ligase IIIa |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.270879137859077 | bayes_pls_golite062009 |
|
Region A: Residues: [120-493] |
1 11 21 31 41 51
| | | | | |
1 TPAKKKTEEK EEKGDVEATP SRKRKNEETL KSKRPTEFNE ESDFNSFYKF VKVCSVLKEI 60
61 SVKSEKSAVI TSLLQKKNFD GDLMLWLTFL IRESDQRSYN ITDEKLIQYF AKILDMGESK 120
121 IQKYVTKSND IALSISHAHE KKVTNEKGKW SLQKLDRYLE KLSKIEDDDA ILSHLKFAAK 180
181 RMRHDELDIL IRLIRKELDT DADASIILKG VHPKAPEIFQ SNGLDSVIEK YYNNDFEKSA 240
241 QQKTSSSKNK VAEPSFKKSK RQEESDDEES DVEMSNSESE GDQDSDSGSD NEEEISGSDS 300
301 DDVSEISSDD EEESSFKENS PKKVARGTRT RPRGNDGNII QKEECPPDME ACRYGEKCYR 360
361 KNKDHLDSFW HPAH
|
| Detection Method: | |
| Confidence: | 78.69897 |
| Match: | 1x9nA |
| Description: | Crystal Structure of Human DNA Ligase I bound to 5'-adenylated, nicked DNA |
Matching Structure (courtesy of the PDB): |
|
