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View Structure Prediction Details

Protein: CE06100
Organism: Caenorhabditis elegans
Length: 694 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06100.

Description E-value Query
Range
Subject
Range
gi|26338430 - gi|26338430|dbj|BAC32886.1| unnamed protein product [Mus musculus]
446.0 [0..3] [680..4]

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Predicted Domain #1
Region A:
Residues: [1-694]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDGQYGPIS AGIIRSITDK SYERRKAAAL DVEKLVRDLF NNNQLSQLDK CLSVLGELIN  60
   61 SGNSNQRKGG LIGMAAASIA LGNKNAPPYT AKLVEPIIPC FHDADLQIRY YACESLYNIA 120
  121 KICKTSVLAH FEDIFDVLWR VTADSDQNVR GGAELLNRLI TEIVLSEQEF DIAILMSLIR 180
  181 DRIYTQTSSN RRFILEWLNT IDSAPFFSFC NYISEISDGL FKMLGEQAPA VRDLCETVLG 240
  241 NFLTAIRSKP ESLSLEDRIQ MINVLVVHTH ENEPFLARKL SLIWLEEFVK LYKTDLLVML 300
  301 STCLVGILPS IVETELKADA VNRLLMALVG EAKLEQDILD KTIEVLLKYI KYDVVETRVT 360
  361 VLNWIRHLHS SMPGQLFVHM HQIFPVLLNT LSDTSDEVLL LDLFLISNIC QSESAPDQVD 420
  421 VSTFGLNETE LKQVSHISPF LIKFVLSLLE MFRTEPTLLR ERGVLIIRQL CLLLEPAHIY 480
  481 RVICVLLERE SKHNFAQEMV STLHGVLLTA TELFILRDEL RALSNESSRS LFECIFRVWS 540
  541 NRPIALLGLC LLSQHYQQAA DIALLLSQVD ITVDVLLEID KLVNLVESPV LAYVRMDLLS 600
  601 SIHRPPLCTV LSALLMLLPQ SEAFVTLHKR LQAVPALVSI DNSPYAPKVP PCRIDFPPLM 660
  661 LHFKAALARR QTEVRSRHRD LLSGVVTQMK NVKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.154902
Match: 1u6gC
Description: Crystal Structure of The Cand1-Cul1-Roc1 Complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle