| Protein: | cdc-48.3 |
| Organism: | Caenorhabditis elegans |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdc-48.3.
| Description | E-value | Query Range |
Subject Range |
|
|
498.0 | [0..39] | [719..39] |
|
Region A: Residues: [1-724] |
1 11 21 31 41 51
| | | | | |
1 MSSAKKKPSL VTCPQCNAVV LTKDSLRHQD FCGKPVVESE IACAQNGTLR GFNVAVDKAE 60
61 GFLPPDAVGW EKEHSILINQ QTMESLGLLA RQPVRIIHSS DSFIGIVWPC KEVALLKVSI 120
121 ISSRIARERM ITLESCGRVE KLKSLSVTVK TSLTLNPALS GFLEAYLSHS YLQYNSSVDL 180
181 KYLGQNVTVT PEEPIESKMS AMGIDDDKKR NSKVVSTAVG YKIQILNASA EGSTSDVLQT 240
241 LPTDLSNIGG CFTAKQVLED YVISPVRQKE SPCSVLIWGL PGSGKTLLLK EVALVLSGST 300
301 TYIGSCEELM ELNGVTTGNI VIVDVNELEK ENTKANRALS FLLGDEKKCV ILCVRSSETL 360
361 DIGFRVRFPI EAEITVPTQD ERLDILSKIG NIYNFPLELH LDVARHTHGF TGGDLCSLLK 420
421 AAKFARGRTH LERVNDARKR IRPTGIRQFI LEVPNVSWND IGGNEELKLE IQQAVIWPQK 480
481 HPEAFERFGI DPPAGILLYG PPGCSKTLIA RALASEAKMN FLAVKGPELF SKWVGDSEKA 540
541 IRDLFSRARQ VAPTIVFFDE IDAVGSSRGS EKSSGVSDRV LAQLLTELDG LEKSSRVILL 600
601 AATNRPDQLD SALLRPGRLD RAIYVGLPCE VTRRAILEMR TKKMKFDDTV RTIDKLVEKT 660
661 SGYSGAELVA VCRTAAMFAM RESIDATIVQ WTHFEQALAA VVSRTEAYLL EIYDDFKAGR 720
721 ASNA
|
| Detection Method: |  |
| Confidence: | 137.0 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
