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View Structure Prediction Details

Protein: CE06040
Organism: Caenorhabditis elegans
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06040.

Description E-value Query
Range
Subject
Range
gi|157762394 - gi|157762394|ref|XP_001673539.1| Hypothetical protein CBG23469 [Caenorhabditis briggsae AF16]
gi|187020983, gi... - gi|39592248|emb|CAE75469.1| Hypothetical protein CBG23469 [Caenorhabditis briggsae], gi|187020983|em...
367.0 [0..2] [313..3]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITSMPYNRL REAILHKRKL SKHILVAMVL ISSMLLLINI MQDSNEEGDD VPVEGTPTFK  60
   61 AFYNCVYPKL ASLRGNYEMF WTSFVNLTKE CDGLEEYKAL DIQPVANTDE VKYVAFPKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DENITMVTLG IGHDVDAEMR LKKLWPKTEF FGVDPSPEIN KDLYEVKLGG NYFQIAVSGK  60
   61 GGMQKSYIFR KEYRDEATMH IGADYFFGDM LQKPRVDILW MDTEGNEFPV LDMIHRGGPL 120
  121 DQRGVTICQM NIEIHKDLMK DITGEREKFH DFVWKLLADK KYIMVKPFYV YWFHQFIRTV 180
  181 IINVADPECT NLYMN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 2py6A
Description: No description for 2py6A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle