| Protein: | CE05989 |
| Organism: | Caenorhabditis elegans |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05989.
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..12] | [353..5] |
|
Region A: Residues: [1-409] |
1 11 21 31 41 51
| | | | | |
1 MEFTECKTTF IHLPDKSFLY DVFVSVYNFY HPIHAYLSIF LCVLGTIANF CNIVVLTRRT 60
61 MRTPVNMILT AMASCDTVVL FSNLIYTTHY SFVAFKFCHP KHWSYSWALF LIAHAHLSLV 120
121 AHSSSVWLSV MLALVRYVTL RSRGNMGGMQ VTLRHSYYAV AVTVSLVAVL NAPNFLNYKI 180
181 NEQPLNETCT DLDPMFWNSP AYLPGIADIA KANSCLVFRL SYWISGMVFK VLPCALLSLF 240
241 VWLLLRILRE VRENRQRLLK NSQHRPPNQT TTRNGQRLSI SVAGNEKLGR NGSLRGRGER 300
301 VDRTTHMLLA IVAVMLVTEL PQGIMAVLSG MCSEEFRIYI YNNLGDILDL FSLCGSCCSF 360
361 IIYCSMSGQF RNEFHRVFVP AKVRCLRMSS PSIRRPSDAY STTKMTFLK
|
| Detection Method: |  |
| Confidence: | 47.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [410-510] |
1 11 21 31 41 51
| | | | | |
1 PNEKNGNGMN GNGTYSEDTR SASVKMVGIQ VRRNSTEITR MTGCDSITPC SPMPTSFPSS 60
61 PLPPIRSGED ESTDETSHLL NSSGPNSTAS ADGIRGHFQN I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
