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View Structure Prediction Details

Protein: CE05922
Organism: Caenorhabditis elegans
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05922.

Description E-value Query
Range
Subject
Range
gi|114589192 - gi|114589192|ref|XP_516736.2| PREDICTED: similar to KIAA1160 protein [Pan troglodytes]
369.0 [0..1] [265..101]
gi|109098078 - gi|109098078|ref|XP_001094091.1| PREDICTED: similar to CG9667-PA [Macaca mulatta]
357.0 [0..1] [265..78]
gi|6330157 - gi|6330157|dbj|BAA86474.1| KIAA1160 protein [Homo sapiens]
352.0 [0..1] [265..21]
gi|73984510 - gi|73984510|ref|XP_849089.1| PREDICTED: similar to CG9667-PA isoform 6 [Canis familiaris]
346.0 [0..1] [265..1]
gi|187021310, gi... - gi|39591921|emb|CAE75141.1| Hypothetical protein CBG23070 [Caenorhabditis briggsae], gi|187021310|em...
gi|157763048 - gi|157763048|ref|XP_001673866.1| Hypothetical protein CBG23070 [Caenorhabditis briggsae AF16]
333.0 [0..1] [267..1]
CG9667-PA - This gene is referred to in FlyBase by the symbol Dmel\CG9667 (CG9667, FBgn0037550). It is a protein...
333.0 [0..1] [265..1]
gi|50510817 - gi|50510817|dbj|BAD32394.1| mKIAA1160 protein [Mus musculus]
325.0 [0..1] [265..16]
ISY1_RAT - Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus GN=Isy1 PE=2 SV=1
322.0 [0..1] [265..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARNAEKAMT ALARWRRMKE EEERGPIARR PHDVKDCRNL SDAERFRREI VRDASKKITA  60
   61 IQNPGLGEFK LRDLNDEVNR LIKLKHAWEQ RIRELGGTDY RKYAQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.39794
Match: 1x4tA
Description: Solution structure of Isy1 domain in hypothetical protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [106-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KELDAIGRET GNSRGYKYFG AAKDLPGVRE LFEKSTEGEE QRRHRADLLR NIDAHYFGYL  60
   61 DDEDGRLIPL EKLIEEKNIE RINKEFAEKQ AQKQQTASDA APENIYKVEE DDDDDLETQE 120
  121 STVIGEDGRP MTIRHVLLPT QQDIEEMLLE QKKQELMAKY LD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 61.376751
Match: PF06246.3
Description: No description for PF06246.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle