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View Structure Prediction Details

Protein: eak-4
Organism: Caenorhabditis elegans
Length: 247 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eak-4.

Description E-value Query
Range
Subject
Range
CE09395 - status:Partially_confirmed UniProt:Q93484 protein_id:CAB02933.1
257.0 [0..45] [246..7]
gi|157759457 - gi|157759457|ref|XP_001672072.1| Hypothetical protein CBG13526 [Caenorhabditis briggsae AF16]
gi|39587907, gi|... - gi|39587907|emb|CAE67926.1| Hypothetical protein CBG13526 [Caenorhabditis briggsae], gi|187028554|em...
172.0 [0..78] [226..15]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQCLAVHRR IMASQEFPNI PQPESQCHDA FIRYSPGRYE RRAARSQVDY YLLPQAPRLM  60
   61 TEDLDKKEFQ RLYDARCELV ECPAGRRAMQ LDVQIYADRY EATLNKILET SQELDKGLED 120
  121 IFQAYTKDDP LADKVMNCRL TVDEMGRVYE HFFRESAWNL DSFVEYRKNL ARDAYLLLAD 180
  181 LKIAIQRLGM HFNPNFEDAQ VKVDFQIMQA EQIIFHFKRT YRDALKHNPD SITEFVEDEL 240
  241 EDPGTPL

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle